Instructors: Martin
Kupiec, Eytan Ruppin and Roded Sharan
Office hours: by appointment.
Following is a tentative outline of the course, which will be updated according to what is actually studied in class:
|
Week |
Date |
Lecture & handouts |
Read more |
|
1 |
21 Feb |
Introduction to Molecular & Systems Biology (I) |
|
|
2 |
28 Feb |
Introduction to Molecular & Systems Biology (II) |
|
|
3 |
7 Mar |
Calssification, Clustering & Biclustering |
|
|
4 |
14 Mar |
Transcriptional
regulation: promoter sequence analysis |
Tanay et al. PNAS’04 (SAMBA) |
|
5 |
21
Mar |
Discussion
on the power of gene expression analysis (emphasis on the SAMBA paper) |
|
|
6 |
28
Mar |
Tirgul:
construction and analysis of biclusters |
|
|
7 |
4
Apr |
Genetic and protein-protein interactions (discussion
on the Kelley et al. paper) |
|
|
8 |
11 Apr |
Network
analysis |
|
|
9 |
2 May |
Metabolism
I: introduction |
|
|
10 |
16 May |
Metabolism II: modeling |
|
|
11 |
23 May |
Metabolism III: disease modeling |
|
|
12 |
30 May |
Guest lecture |
|
|
13 |
Jun 6 |
Metabolism IV |
|
Bibliography and Notes
A recommended book on introduction to biology is 'Molecular Biology of the Cell' by Alberts et al.