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Prokaryotes
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Biological Background
Finding Genes in Prokaryotes
Prokaryotes
Long ORFs
Open Reading Frames (ORFs)
Finding long ORFs
Detection of Coding Regions
Codon frequencies in coding regions
ORFs as Markov chains
Using codon frequencies
Detection of Promoter Regions
RNA Transcription
E.coly
promoters
Positional Weight Matrix
Scoring Function
Promoter variation
Peer Itsik
2000-12-25
