Bibliography

1

M. Connolly.
Measurement of protein surface shape by solid angles.
J. Mol. Graph., 4:3-6, 1986.

2

M.L. Connolly.
Solvent-accessible surfaces of proteins and nucleic acids.
Science, 221:709-713, 1983.

3

M. Gerstein, A.M. Lesk, and C. Chothia.
Structural Mechanisms for Domain Movements in Proteins.
Biochemistry, 33(22):6739-6749, 1994.

4

Nussinov-Wolfson group of Computational Structural Biology.
The C-Alpha Matching program.
http: //pc-gamba.math.tau.ac.il/software.html.

5

I. Kuntz, J. Blaney, S. Oatley, R. Langridge, and T. Ferrin.
A geometric approach to macromolecule-ligand interactions.
J. Mol. Biol., 161:269-288, 1982.

6

Brookhaven National Laboratory.
PDB - Protein Data Bank.
http: //www.rcsb.org/pdb/index.html.

7

Y. Lamdan, J. T. Schwartz, and H. J. Wolfson.
Object Recognition by Affine Invariant Matching.
In Proceedings of the IEEE Computer Vision and Pattern Recognition Conf., pages 335-344, Ann Arbor, Michigan, June 1988.

8

Y. Lamdan, J. T. Schwartz, and H. J. Wolfson.
On Recognition of 3-D Objects from 2-D Images.
In Proceedings of IEEE Int. Conf. on Robotics and Automation, pages 1407-1413, Philadelphia, Pa., April 1988.

9

B. Lee.
The interpretation of protein structures: estimation of static accessibility.
J. Mol. Biol., 55:379-400, 1971.

10

S. L. Lin, R. Nussinov, D. Fischer, and H.J. Wolfson.
Molecular Surface Representation by Sparse Critical Points.
PROTEINS: Structure, Function and Genetics, 18:94-101, 1994.

11

M. Shatsky, Z.Y. Fligelman, H.J. Wolfson, and R. Nussinov.
Alignment of flexible protein structures.
In Proc. 8th International Conference on Intelligent Systems for Molecular Biology (ISMB '00), pages 329-343, 2000.

12

S. Umeyama.
Least-Squares Estimation of Transformation Parameters Between Two Point Patterns.
IEEE Transactions on Pattern Analysis and Machine Intelligence, PAMI-13(4):376-386, April 1991.
Comparing proteins 3D structure algorithm.

13

G. Verbitsky, R. Nussinov, and H.J. Wolfson.
Structural Comparison Allowing Hinge Bending, Swiveling Motions.
PROTEINS: Structure, Function and Genetics, 1998.
in press.